Hlep understanding Up2date

I need help understanding up2date
I set my server to be updated via up2date yesterday and
in the process several files were remove.
This morning I come in to find that mysql version 4 was
removed
and with that mysql-client and mysql-server.

This is part of the up2date message:
====================================================
Package Installed:
   ['XFree86-4.3.0-115.EL',
'XFree86-Mesa-libGL-4.3.0-115.EL',
'XFree86-base-fonts-4.3.0-115.EL',
'XFree86-font-utils-4.3.0-115.EL',
'XFree86-libs-4.3.0-115.EL',
'XFree86-libs-data-4.3.0-115.EL',
'XFree86-xauth-4.3.0-115.EL', 'XFree86-xdm-4.3.0-115.EL',
'XFree86-xfs-4.3.0-115.EL', 'bind-9.2.4-20.EL3',
'bind-libs-9.2.4-20.EL3', 'bind-utils-9.2.4-20.EL3',
'fetchmail-6.2.0-3.el3.3', 'gnupg-1.2.1-19',
'info-4.5-3.el3.1', 'kdelibs-3.1.3-6.12', 'libgsf-1.6.0-7',
'openoffice.org-1.1.2-35.2.0.EL3',
'openoffice.org-libs-1.1.2-35.2.0.EL3',
'openssh-3.6.1p2-33.30.13',
'openssh-askpass-3.6.1p2-33.30.13',
'openssh-askpass-gnome-3.6.1p2-33.30.13',
'openssh-clients-3.6.1p2-33.30.13',
'openssh-server-3.6.1p2-33.30.13',
'perl-DBD-MySQL-2.1021-4.EL3', 'python-2.2.3-6.5',
'qt-3.1.2-14.RHEL3', 'sysreport-1.3.7.2-18',
'tar-1.13.25-15.RHEL3', 'tzdata-2006m-3.el3',
'XFree86-Mesa-libGLU-4.3.0-115.EL',
'mysql-3.23.58-16.RHEL3.1'] 

Package Added To Profile:
   ['XFree86-4.3.0-115.EL',
'XFree86-Mesa-libGL-4.3.0-115.EL',
'XFree86-Mesa-libGLU-4.3.0-115.EL',
'XFree86-base-fonts-4.3.0-115.EL',
'XFree86-font-utils-4.3.0-115.EL',
'XFree86-libs-4.3.0-115.EL',
'XFree86-libs-data-4.3.0-115.EL',
'XFree86-xauth-4.3.0-115.EL', 'XFree86-xdm-4.3.0-115.EL',
'XFree86-xfs-4.3.0-115.EL', 'bind-9.2.4-20.EL3',
'bind-libs-9.2.4-20.EL3', 'bind-utils-9.2.4-20.EL3',
'fetchmail-6.2.0-3.el3.3', 'gnupg-1.2.1-19',
'info-4.5-3.el3.1', 'kdelibs-3.1.3-6.12', 'libgsf-1.6.0-7',
'mysql-3.23.58-16.RHEL3.1',
'openoffice.org-1.1.2-35.2.0.EL3',
'openoffice.org-libs-1.1.2-35.2.0.EL3',
'openssh-3.6.1p2-33.30.13',
'openssh-askpass-3.6.1p2-33.30.13',
'openssh-askpass-gnome-3.6.1p2-33.30.13',
'openssh-clients-3.6.1p2-33.30.13',
'openssh-server-3.6.1p2-33.30.13',
'perl-DBD-MySQL-2.1021-4.EL3', 'python-2.2.3-6.5',
'qt-3.1.2-14.RHEL3', 'sysreport-1.3.7.2-18',
'tar-1.13.25-15.RHEL3', 'tzdata-2006m-3.el3']

Package Removed From Profile:
   ['MySQL-client-4.0.21-0', 'MySQL-server-4.0.21-0',
'XFree86-4.3.0-113.EL', 'XFree86-Mesa-libGL-4.3.0-113.EL',
'XFree86-base-fonts-4.3.0-113.EL',
'XFree86-font-utils-4.3.0-113.EL',
'XFree86-libs-4.3.0-113.EL',
'XFree86-libs-data-4.3.0-113.EL',
'XFree86-xauth-4.3.0-113.EL', 'XFree86-xdm-4.3.0-113.EL',
'XFree86-xfs-4.3.0-113.EL', 'bind-9.2.4-14_EL3',
'bind-libs-9.2.4-14_EL3', 'bind-utils-9.2.4-14_EL3',
'fetchmail-6.2.0-3.el3.2', 'gnupg-1.2.1-17', 'info-4.5-3',
'kdelibs-3.1.3-6.10', 'libgsf-1.6.0-4',
'openoffice.org-1.1.2-34.2.0.EL3',
'openoffice.org-libs-1.1.2-34.2.0.EL3',
'openssh-3.6.1p2-33.30.12',
'openssh-askpass-3.6.1p2-33.30.12',
'openssh-askpass-gnome-3.6.1p2-33.30.12',
'openssh-clients-3.6.1p2-33.30.12',
'openssh-server-3.6.1p2-33.30.12',
'perl-DBD-MySQL-2.1021-3', 'python-2.2.3-6.3',
'qt-3.1.2-13.4', 'sysreport-1.3.7.2-17',
'tar-1.13.25-14.RHEL3', 'tzdata-2006g-1.EL3']
===========================================================
Thanks,

Néstor 

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