Hi,
I am writing to this list to ask for help with 'beta
testing' the latest
version of CD-HIT. Weizhong Li recently released a new
version, which
you can find here...
http://bioinformatics.org/project/filelist.php?group_
id=350
(its 'cd-hit-2006-0215.tar.gz')
If anyone on this list uses (or has used) CD-HIT, they may
like to help
out on the 'CD-HIT team' (currently me running the website
and Weizhong
doing everything else!) by testing this release.
It would be very helpful if anyone can spare the time to
check over this
release, and write some general notes on the experience
(what went
wrong, what was not clear etc. etc.) and post those comments
to the
mailing list,
http://b
ioinformatics.org/mail/?group_id=350
At the moment any feedback on usage is welcome, as
unfortunately I don't
have the time to check this version in any detail. More
generally, any
assistance on the project is most welcome! Once we finish
testing we can
announce the new release on the BBB, and it would be great
to have a big
list of people to thank for contributing to such great
software. Anyone
who wants to be added to the list of developers on the
project please
just email me your Bioinformatics.Org username!
Thanks very much for your time (and support),
Dan.
P.S. I put a 'test set' of data here;
http://ftp.bioinformatics.org/pub/cd-hit/TEST_RESULTS/
and you can find a list of the current bugs here;
http://b
ioinformatics.org/bugs/?group_id=350
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rs
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