Shouldn't you have run your delete query on all tables that
contain a
site_id column - just to be sure you'd flushed everything
out?
assets, cached_pages, content_versions, events, feedbacks,
memberships
and sections
My guess would be that the events table (which is used to
populate the
admin overview page) is linking to one of the articles in
the contents
table that you deleted.
Rob
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