Update from Xorg 6.9 to 7.3 in FreeBSD 6.2

Dear Sir:
  I have tried to update from Xorg 6.9 to 7.3 in FreeBSD
6.2, And I read 
the UPDATE. It tells that “Depending on your system
configuration you may 
have to resolve some of these conflicts by hand first”.
Does this mean I 
must resolve some of these conflicts before I run the
mergebase.sh? How can 
I know these conflicts before running mergebase.sh? 
  In my previous experiments, I run mergebase.sh. And the
merge will fail, 
but the output would tell me which files cause the
conflicts, and I delete 
these files, then I run mergebase.sh again. Is this method
OK?
Please give me some hint, Thanks!

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